U-Net Based approach for Brain Tumor Segmentation
DOI:
https://doi.org/10.71147/25jgwp11Keywords:
Brain tumor; CNN; Segmentation; U-net.Abstract
Brain tumor segmentation plays a vital role in medical image analysis, offering crucial insights for diagnosis, treatment planning, and surgical guidance. However, manual segmentation by radiologists is often time-intensive, subjective, and susceptible to variability between observers. In this study, an automated segmentation approach is proposed using a U-Net-based convolutional neural network (CNN), which is specifically tailored for biomedical image segmentation tasks. The model is trained and tested on MRI images, with preprocessing and data augmentation techniques applied to improve its generalization performance. To evaluate the effectiveness of the segmentation, commonly used metrics such as dice coefficient, Intersection over Union (IoU), accuracy, and sensitivity are employed. These metrics collectively assess the model’s precision in identifying tumor boundaries, ensuring high overlap with tumor regions while minimizing errors like false positives and false negatives. The used model achieved an accuracy of 99.44%, a Dice score of 83.76%, and an IoU of 72.70%. These results demonstrate the U-Net-based framework's robustness and reliability, highlighting its potential to assist radiologists in achieving faster and more consistent brain tumor segmentation
References
Abd-Ellah, M. K., Awad, A. I., Khalaf, A. A., & Hamed, H. F. (2019). A review on brain tumor diagnosis from MRI images: Practical implications, key achievements, and lessons learned. Magnetic resonance imaging, 61, 300-318.
Cheng, Jun (2017). brain tumor dataset. figshare. Dataset. https://doi.org/10.6084/m9.figshare.1512427.v8
Cherguif, H., Riffi, J., Mahraz, M. A., Yahyaouy, A., & Tairi, H. (2019, December). Brain tumor segmentation based on deep learning. In 2019 International Conference on Intelligent Systems and Advanced Computing Sciences (ISACS) (pp. 1-8). IEEE.
Ghosh, S., & Santosh, K. C. (2021, June). Tumor segmentation in brain MRI: U-Nets versus feature pyramid network. In 2021 IEEE 34th International Symposium on Computer-Based Medical Systems (CBMS) (pp. 31-36). IEEE.
Hamim, S. A., & Jony, A. I. (2024). Enhancing brain tumor MRI segmentation accuracy and efficiency with optimized U-Net architecture. Malaysian Journal of Science and Advanced Technology, 197-202.
Kaifi, R. (2023). A review of recent advances in brain tumor diagnosis based on AI-based classification. Diagnostics, 13(18), 3007.
Kasar, P., Jadhav, S., & Kansal, V. (2024, October). Brain Tumor Segmentation using U-Net and SegNet. In International Conference on Signal Processing and Computer Vision (SIPCOV-2023) (pp. 194-206). Atlantis Press.
KK, K., Rajan, M. S., Hegde, K., Koshy, S., & Shenoy, A. (2013). A COMPREHENSIVE REVIEW ON BRAIN TUMOR. International Journal of Pharmaceutical, Chemical & Biological Sciences, 3(4).
Missaoui, R., Hechkel, W., Saadaoui, W., Helali, A., & Leo, M. (2025). Advanced Deep Learning and Machine Learning Techniques for MRI Brain Tumor Analysis: A Review. Sensors, 25(9), 2746.
Obayya, M., Alshuhail, A., Mahmood, K., Alanazi, M. H., Alqahtani, M., Aljehane, N. O., ... & Al-Hagery, M. A. (2025). A novel U-net model for brain tumor segmentation from MRI images. Alexandria Engineering Journal, 126, 220-230.
Ronneberger, O., Fischer, P., & Brox, T. (2015). U-net: Convolutional networks for biomedical image segmentation. In Medical image computing and computer-assisted intervention–MICCAI 2015: 18th international conference, Munich, Germany, October 5-9, 2015, proceedings, part III 18 (pp. 234-241). Springer international publishing.
Van Truong, P., & Thao, T. T. (2021). Brain tumor segmentation based on U-Net with image driven level set loss. Vietnam Journal of Science and Technology, 59(5), 634-642.
Walsh, J., Othmani, A., Jain, M., & Dev, S. (2022). Using U-Net network for efficient brain tumor segmentation in MRI images. Healthcare Analytics, 2, 100098.
Wang, R., Lei, T., Cui, R., Zhang, B., Meng, H., & Nandi, A. K. (2022). Medical image segmentation using deep learning: A survey. IET image processing, 16(5), 1243-1267.
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Copyright (c) 2025 Abdelkader Alrabai (Author)

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